CDS

Accession Number TCMCG058C18734
gbkey CDS
Protein Id KAF7140543.1
Location complement(join(34042921..34043298,34043404..34043518,34043820..34043854,34043949..34044051,34044406..34044488,34044783..34044820,34044907..34044976,34045225..34045246,34045456..34045475,34045671..34045687,34045832..34045854,34045967..34046181,34046268..34046448,34046573..34046606,34046686..34046696,34046759..34046785,34046851..34046867,34046990..34047027,34047162..34047181,34047358..34047376,34047510..34047519,34047705..34047730,34047838..34047915,34048631..34049186,34049684..34049769,34050818..34050838,34050953..34050974,34051150..34051205,34052017..34052287))
Organism Rhododendron simsii
locus_tag RHSIM_Rhsim06G0220200

Protein

Length 863aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA588298, BioSample:SAMN13241185
db_source WJXA01000006.1
Definition hypothetical protein RHSIM_Rhsim06G0220200 [Rhododendron simsii]
Locus_tag RHSIM_Rhsim06G0220200

EGGNOG-MAPPER Annotation

COG_category A
Description Splicing factor, suppressor of white-apricot homolog
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000245        [VIEW IN EMBL-EBI]
GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000380        [VIEW IN EMBL-EBI]
GO:0000395        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006376        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0022618        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0033119        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043484        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0045292        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048024        [VIEW IN EMBL-EBI]
GO:0048025        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050684        [VIEW IN EMBL-EBI]
GO:0050686        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071826        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1903311        [VIEW IN EMBL-EBI]
GO:1903312        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATCTGGAAGTAGTGGGGCGCCACGCCCTCCTCTTCGACGACGACGCGACGGCGTCGTTCGTCAACTCCACCGATGCCCTCGTCGACTGGAACTCTCTCCTCATCGACCGCTACGACGTCCGCCACCTCCTCTCCAGCCCTCCGCCGCCCAGGCGGCGGCGCAACCCTCAGCAGACGCAGCACTCTCCTCCCCCTTCCGCCTCTTCGATTGAATCCGAGCTCGATCACGAACGATTCATCGATCTCCCGCCGCCATCAGACGAACAAGGAGTCGAGGACAGATTACTTAAATGCCACTCGAGTGATATGGTTACTAGTTGTGTAAGTCACAGAACCGTCTATTGCGTCTATGCGAAGGTCTTAGAATCTGATCAGAAGAACTCGGATGATGGACAAGGGAATTCGGGTTTTCATCCGCCCTTCCCTGTTCCCGAAAGCTTACTTCAAAGCCTACCTCCAACAGAGAAGGTACATCAGATAATTGCAAGGACTGCAGTATTTGTCAGCAAACATGGTGGGCAGTCAGAGATTGTTCTGAGGGTGAAACAGGGAGACAACCCCACATTTGGTTTCTTGATGCCTGATCATTATCTTCATGCCTACTTTAGGTTTCTTGTTGATCATCAGGATCTTGTGCAGTCTAGTACTGATGGAAAAACTGAAACTGAGAAGAAAGGTAATGCAGAGAGCAATCAGACAGATGGTGTTGTGGCTGGGGCTCTCTCTTTGCTGGGTTCTGTTTATGGGTCAGGTGAGGACGAGGATGGAGCAGATAAGGATGGCGAAGTCGCCCCAGAATCTAAAGAAATTTTGTCTGGGAAAACCTTTGATGCTAGCGATGGAGCAGTTTCTGTTGGTTTTGCGAAAACTGATATCACTAGAAGTATAGATGGAAAAAATGAGGCTTTTGGCAAGCATTCAAGCGTTTCCAAAGAAAAATTTCATATACCAAAAAGGAATTCTTTCACTTGTGCACCCAAGTCTGGAACTACAAACAGCACGAAAAAAGCCTATCTTATCTTAAATCTGTTTAACGTCAATGAGTTTTTGTGTATCTTGATTTTGAGTAGTAACAGTTACTTCGGTGGCACTTTGTGCTGTCCAGGATTTTCTTTGAAGTTGAGAAAGAAAAGTTTAGAATGTCATGGTCGAAATAGTGAAGACCGAGAGGCTAAAACGGGCAAAAAAGTTTGTAGCCATAAGGCATTTCTGTTCCTGAGATCAAAGAGGAAATACCGGTCAAATAGAAGAAATAAAGAAGAAGAAGATAAAGAGGAAAGGGATTACAGGAAGAAGATTATGAAGACGAAAGAGTTCACAAGCACTCAAGGAAAAAGCACCGGTCACATCGCTCATCAGACGATGAAGAAGATTATGAAGAGGAAAGGAATCGAAAGCATTCAAGGAAGAAGAAGCACAAATCTCATAGTTCTTCAAGACACCATAGAGACAGGCATAAGCACAAGGAGGATATCTCATTCAGAGGAAGAGCTGGAGGAAGGAGAGATCAGTTCAAAAATGTCGGACAAATCTAGAGGAAGTGTGGCTGCTGGTGTTAGTAGGGAAGCTTCTGTGGATGTATCAAGTTCCTATCGAGATGGTAGAGCTTCTTCTCAGCCCTCGGAAGCTACTGAGGTCTCTGATGAACTCAGAGCCAAGATCCGGGCTATGTTGATGGCAAACTTTTGTCCCATTTCACATGTTAGCTTTATTCGAGTTCAATTTTTCAAATTTTGCACTCTCGACAATGCAAGGGCTCTAGCAAAGATGTTGAAAGGGGGGACACATCTATTAAGCGGTCACGGGCAACAAACATACAGATGTTTCATGCTTAAGTCTCATTCCTATTGCCACTTGATCCCTATTGCCACTTTAGTCCTGGGGTACAGTCACATGGTGCCTAACACCTTTATTTATTGCACAATTTTTTACGGTTCATGGACTCGGTCAAGAAAAATCGAGAAAAATTTCAAAAGCACTCTGCATCAGTCTCGCTCACAATTGCGGAAAAGTAAAAAAGCTACAGTTCCCTCGTTTTTCTTAAAGAGCAACTGTTCCTCGGATAAAATGATCAGAAAAATAAGATCTTTGCACTGGTGTGGTTCAGTTCCCTACAGATATTGGTGTCGTATGACAGGACAATATTTCTTGACAAAGGTGACGAGGTATCATATATGCACTTGTATTTTGTGCACCAAAAAAAAACACGTGCATTCAAGGAAGAAGAAGCACAAATCTCATAGTTCTTCAAGACACCATAGAGACAGGCATAAGCACAAGGAGGGTCATCGTTCTTCTTCCAAGAACAAGCATGAGAGCTCCTCTGATGAGGAGCATCTTCATCGTGACAGTTCTAATAAGCATCGAAAGATATCTCATTCTGAAGAAGAGCTGGAGGAAGGAGAGATCAGTTCAAAAATGTCGGACAAATCGAGAGGAAGTGTGGCTGCTGGTGTTAGTAGGGAAGCTTCTCTGGATGTATCAAGTTCCTATCGAGATGGTAGAGCTTCTTCTCAGCCCTCGGAAGCTACTGAGGTCTCTGATGAACTCAGAGCCAAGATCCGGGCTATGTTGATGGCAAATTTGTAA
Protein:  
MDLEVVGRHALLFDDDATASFVNSTDALVDWNSLLIDRYDVRHLLSSPPPPRRRRNPQQTQHSPPPSASSIESELDHERFIDLPPPSDEQGVEDRLLKCHSSDMVTSCVSHRTVYCVYAKVLESDQKNSDDGQGNSGFHPPFPVPESLLQSLPPTEKVHQIIARTAVFVSKHGGQSEIVLRVKQGDNPTFGFLMPDHYLHAYFRFLVDHQDLVQSSTDGKTETEKKGNAESNQTDGVVAGALSLLGSVYGSGEDEDGADKDGEVAPESKEILSGKTFDASDGAVSVGFAKTDITRSIDGKNEAFGKHSSVSKEKFHIPKRNSFTCAPKSGTTNSTKKAYLILNLFNVNEFLCILILSSNSYFGGTLCCPGFSLKLRKKSLECHGRNSEDREAKTGKKVCSHKAFLFLRSKRKYRSNRRNKEEEDKEERDYRKKIMKTKEFTSTQGKSTGHIAHQTMKKIMKRKGIESIQGRRSTNLIVLQDTIETGISTRRISHSEEELEEGEISSKMSDKSRGSVAAGVSREASVDVSSSYRDGRASSQPSEATEVSDELRAKIRAMLMANFCPISHVSFIRVQFFKFCTLDNARALAKMLKGGTHLLSGHGQQTYRCFMLKSHSYCHLIPIATLVLGYSHMVPNTFIYCTIFYGSWTRSRKIEKNFKSTLHQSRSQLRKSKKATVPSFFLKSNCSSDKMIRKIRSLHWCGSVPYRYWCRMTGQYFLTKVTRYHICTCILCTKKKHVHSRKKKHKSHSSSRHHRDRHKHKEGHRSSSKNKHESSSDEEHLHRDSSNKHRKISHSEEELEEGEISSKMSDKSRGSVAAGVSREASLDVSSSYRDGRASSQPSEATEVSDELRAKIRAMLMANL